Covid: New variant classed 'of concern' and named Omicron

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Train used as vaccination centre in East Rand, South AfricaImage source, Reuters
Image caption,
Only about 24% of South Africans have been fully vaccinated so far

The World Health Organization (WHO) has declared a new coronavirus variant to be "of concern" and named it Omicron.

It had a large number of mutations, and early evidence suggested an increased reinfection risk, the WHO said.

It was first reported to the WHO from South Africa on 24 November, and has also been identified in Botswana, Belgium, Hong Kong and Israel.

A number of countries around the world have now decided to ban or restrict travel to and from southern Africa.

US officials said flights from South Africa, Botswana, Zimbabwe, Namibia, Lesotho, Eswatini, Mozambique and Malawi would be blocked, mirroring earlier moves taken by the EU. It will come into effect on Monday.

Brazil and Australia also introduced travel restrictions.

'Bad news - but not doomsday'

On Friday, the WHO said the number of cases of this variant, initially named B.1.1.529, appeared to be increasing in almost all of South Africa's provinces. 

"This variant has a large number of mutations, some of which are concerning," the UN public health body said in a statement.

It said "the first known confirmed B.1.1.529 infection was from a specimen collected on 9 November".

The WHO said it would take a few weeks to understand the impact of the new variant, as scientists worked to determine how transmissible it was.

A top UK health official warned that vaccines would "almost certainly" be less effective against the new variant.

But Professor James Naismith, a structural biologist from the University of Oxford, added: "It is bad news but it's not doomsday."

He said mutations in the variant suggested it may spread more quickly - but transmissibility "is not just as simple as 'this amino acid does this'" and was determined by how mutations worked together.

Only about 24% of South Africa's population is fully vaccinated, which could spur a rapid spread of cases there, Dr Mike Tildesley, a member of the Scientific Pandemic Influenza Modelling group (Spi-M), told the BBC on Friday.

Meanwhile, US infectious disease chief Dr Anthony Fauci said that while the reports on the new variant threw up a "red flag", it was possible that vaccines might still work to prevent serious illness.

"Until it's properly tested... we don't know whether or not it evades the antibodies that protect you against the virus", Dr Fauci told CNN.

Media caption,

Watch: WHO name omicron "variant of concern"

The WHO has warned against countries hastily imposing travel restrictions, saying they should look to a "risk-based and scientific approach".

However, in addition to the UK, and the US and the EU, a host of other countries have also announced restrictions:

  • Australia announced on Saturday that flights from South Africa, Namibia, Zimbabwe, Botswana, Lesotho, Eswatini, the Seychelles, Malawi, and Mozambique would be suspended for 14 days. Non-Australians who have been in those countries in the past two weeks are now banned from entering Australia
  • Japan has announced that from Saturday, travellers from much of southern Africa will need to quarantine for 10 days and take a total of four tests during that time
  • India has ordered more rigorous screening and testing for travellers arriving from South Africa, Botswana and Hong Kong
  • Iran will ban travellers from six southern African countries, including South Africa. Iranians arriving from the region will be admitted after testing negative twice, state TV says
  • Brazil also said it was restricting travel to the region from six countries in Africa

South Africa's Health Minister Joe Phaahla told reporters that the flight bans were "unjustified".

"The reaction of some of the countries, in terms of imposing travel bans, and such measures, are completely against the norms and standards as guided by the World Health Organization," he said.

Echoing his words, Angelique Coetzee, chairperson of the South African Medical Association, told the BBC that the travel restrictions on her country were premature.

"For now, it is a storm in a tea cup," she said.

Only about 24% of South Africa's population is fully vaccinated, which could spur a rapid spread of cases there, Dr Mike Tildesley, a member of the Scientific Pandemic Influenza Modelling group (Spi-M), told the BBC on Friday.

Stock markets across the world also fell sharply on Friday, reflecting the fears of investors over the potential economic impact.

The FTSE 100 index of leading UK shares closed 3.7% down, while main markets in Germany, France and the US also sank.

A "variant of concern" is the World Health Organization's top category of worrying Covid variants.

The decision adds weight to the mounting scientific worry about the potential of this new variant, but it doesn't change any of the facts.

The variant has an astounding collection of mutations which are thought to increase its ability to spread and bypass some, but not all, of the protection from vaccines.

However, we still don't have the clear real-world data.

We don't know for sure that it spreads faster, makes vaccines or drugs less effective or whether it leads to more severe disease.

The WHO have also given it a name and ended days of speculation that we would end up in the slightly ridiculous position of calling the new variant the "Nu variant".

There have even been arguments about the correct pronunciation of the Greek letter Nu (it's technically a "Nee").

Instead, you can guarantee we'll be talking a lot about Omicron in the weeks to come.